#Microorganisms & Fungi #2014 – 2017 #Soil organisms #Soil sample #Fungi #Sequencing #Interaction #Genetic diversity #Mycorrhiza fungi #Species biodiversity #Archaea #Bacteria #Plant - fungus interaction #Soil microorganisms #Functional diversity #Microbial community #Nitrogen cycle #Forest #Land use #Species communities

Microorganisms (Core project)

Species diversity and community composition of soil microorganisms in grassland and forest ecosystems along land-use gradients

Core project 8

Picture: The collage contains six photographs of steps in molecular analyses in a laboratory, performed by a scientist. Photo 1 shows a sample standardization device. Photo 2 shows the scientist working on a polymerase chain reaction device. Photo 3 shows the scientist using an electronic pipette to fill a sample into a micro-reaction tube. Photo 4 shows an Illumina MiSeq sequencer. Photo 5 shows the scientist working on a bioinformatics quality control device. Photo 6 shows the scientist at a desk in front of a computer making inputs for assignment.

Background

Microorganisms, especially fungi and bacteria, play an essential role in soil, including as destructors in the decomposition of organic matter and as symbionts for the growth and health of plant partners. In addition to these interactions with plants, soil microorganisms are influenced by environmental changes such as land use and forest management. However, the degree to which individual factors affect microbial diversity and composition is not yet fully understood.

Goals

1. Characterisation of fungi that play a crucial role in the rhizosphere in grasslands and identification of factors that influence their diversity and composition.

2. Examining the relationship between plant traits of grassland species, land-use intensities and the rhizosphere mycobiome.

3. Assessment of the influence of beech ecotypes on the shaping of specific rhizosphere mycobiomes under different management and environmental conditions.

4. Further analysis of land-use intensity and management effects on soil fungal diversity and fungal community composition.

Picture: The photo shows a meadow on which three objects are standing and lying: first, a bucket with small stones in it; second, a yellow bowl containing soil samples with a folding ruler lying on its corner; and third, a clipboard with a form on which a pencil and a knife lie.

Hypotheses

H1: The species diversity and community composition of the active rhizosphere mycobiome in grasslands changes in relation to the functional plant groups and soil parameters.

H2: Differences in rhizosphere-mycobiome composition are related to changes in plant characteristics, land-use intensities and environmental variables.

H3: The interaction between plants and fungi is determined by plant ecotypes.

H4: Land-use and forest management types have an effect on the composition of the fungal community.

Methods

Soil DNA extraction, fungal amplicon library building and next generation sequencing technologies, bioinformatics (MOTHUR & QIIME) and multivariate statistics.

Close collaboration on sample collection and data analysis with exploratory projects:
– ProFIL
– SCALEMIC
– NanoFaun
– Botany
– Soil (Abiotics)
– BELOW
– InDiLaN

Publications

Bark beetle infestation alters mycobiomes in wood, litter, and soil associated with Norway spruce

Masch D., Buscot F., Rohe W., Goldmann K. (2025): Bark beetle infestation alters mycobiomes in wood, litter, and soil associated with Norway spruce, FEMS Microbiology Ecology 101 (3), fiaf015. doi: 10.1093/femsec/fiaf015

Temporal changes of fungal communities and enzyme activities in forest soils

Zeitliche Veränderung von Pilzgemeinschaften und Enzymaktivitäten in Böden von Waldökosystemen

Maier T. C. (2025): Zeitliche Veränderung von Pilzgemeinschaften und Enzymaktivitäten in Böden von Waldökosystemen. Bacherlor thesis, Leipzig University

The influence of forest gaps and their subsequent closure on the diversity of soil fungi

Der Einfluss von Waldlücken auf Bodenpilze

Wöltjen J. (2023): The influence of forest gaps and their subsequent closure on the diversity of soil fungi. Master thesis, University Koblenz-Landau

Influence of land use on the temporal dynamics of fungal communities across the German Biodiversity Exploratories (BE)

Einfluss von Landnutzung auf die zeitlichen Dynamiken von Bodenpilze in den Deutschen Biodiversitätexploratorien (BE)

Rivera Cerquera D. F. (2023): Influence of land use on the temporal dynamics of fungal communities across the German Biodiversity Exploratories (BE). Bachelor thesis, University of Leipzig

Unraveling spatiotemporal variability of arbuscular mycorrhizal fungi in a temperate grassland plot

Goldmann K., Boeddinghaus R. S., Klemmer S., Regan K. M., Heintz-Buschart A., Fischer M., Prati D., Piepho H.-P., Berner D., Marhan S., Kandeler E., Buscot F., Wubet T. (2020): Unraveling spatio‐temporal variability of arbuscular mycorrhiza fungi in a temperate grassland plot. Environmental Microbiology 22 (3), 873-888. doi: 10.1111/1462-2920.14653

Resident and phytometer plants host comparable rhizosphere fungal communities in managed grassland ecosystems

Vergleichbare Pilzgemeinschaften in der Rhizosphäre von ansässigen Pflanzen und Phytometerpflanzen in bewirtschafteten Grünlandökosystemen

Schöps R., Goldmann K., Korell L., Bruelheide H., Wubet T., Buscot F. (2020): Resident and phytometer plants host comparable rhizosphere fungal communities in managed grassland ecosystems. Scientific Reports 10: 919. doi: 10.1038/s41598-020-57760-x

Early stage root-associated fungi show a high temporal turnover, but are independent of beech progeny

Goldmann K., Ammerschubert S., Pena R., Polle A., Wu B.-W., Wubet T., Buscot F. (2020): Early stage root-associated fungi show a high temporal turnover, but are independent of beech progeny. Microorganisms 8 (2), 210. doi: 10.3390/microorganisms8020210

Distribution of Medically Relevant Antibiotic Resistance Genes and Mobile Genetic Elements in Soils of Temperate Forests and Grasslands Varying in Land Use

Verbreitung von medizinisch relevanten Antibiotikaresistenzgenen und mobilen genetischen Elementen in Wald- und Grünlandböden

Willms I. M., Yuan J., Penone C., Goldmann K., Vogt J., Wubet T., Schöning I., Schrumpf M., Buscot F., Nacke H. (2020): Distribution of Medically Relevant Antibiotic Resistance Genes and Mobile Genetic Elements in Soils of Temperate Forests and Grasslands Varying in Land Use. Genes 11 (2), 150. doi: 10.3390/genes11020150

Der Einfluss von Borkenkäfern (Curculionidae, Scolytinae) auf das Mykobiom der Gemeinen Fichte (Picea abies (L.) H. Karst., Pinaceae) im Biodiversitäts-Exploratorium Hainich-Dün

Masch D. (2020): Der Einfluss von Borkenkäfern (Curculionidae, Scolytinae) auf das Mykobiom der Gemeinen Fichte (Picea abies (L.) H. Karst., Pinaceae) im Biodiversitäts-Exploratorium Hainich-Dün. Bachelor thesis, FU Berlin

Belowground plant microbiome diversity and community composition in grassland ecosystems along land-use gradients in the German Biodiversity Exploratories

Unterirdische Pflanzenmikrobiomvielfalt und Gemeinschaftszusammensetzung in Grünlandökosystemen entlang von Landnutzungsgradienten in den deutschen Biodiversitäts-Exploratorien

Schöps R. (2020): Belowground plant microbiome diversity and community composition in grassland ecosystems along land-use gradients in the German Biodiversity Exploratories. Dissertation, Leipzig University

Land-use intensity rather than plant functional identity shapes bacterial and fungal rhizosphere communities

Landnutzungsintsität anstatt von funktionellen Pflanzengruppen beeinflussen die bakterielle und pilzliche Rhizosphärengemeinschaft

Schöps R., Goldmann K., Herz K., Lentendu G., Schöning I., Bruelheide H., Wubet T., Buscot F. (2018): Land-use intensity rather than plant functional identity shapes bacterial and fungal rhizosphere communities. Frontiers in Microbiology 9:2711. doi: 10.3389/fmicb.2018.02711

Auswirkung von pflanzlichen Nachbarschaftseffekten auf die pilzliche Diversität und Gemeinschaftszusammensetzung in der Rhizosphäre

Lohmaier A. (2018): Auswirkung von pflanzlichen Nachbarschaftseffekten auf die pilzliche Diversität und Gemeinschaftszusammensetzung in der Rhizosphäre. Master thesis, University Halle-Wittenberg

Preservation of nucleic acids by freeze-drying for next generation sequencing analyses of soil microbial communities

Weißbecker C., Buscot F., Wubet T. (2017): Preservation of nucleic acids by freeze-drying for next generation sequencing analyses of soil microbial communities. Journal of Plant Ecology 10 (1), 81-90. doi: 10.1093/jpe/rtw042

Datasets

Public Datasets

Comparision of fungal communities in bark beetle affected and unaffected spruces on HEW51 – taxonomy look-up table

Goldmann, Kezia (2023): Comparision of fungal communities in bark beetle affected and unaffected spruces on HEW51 - taxonomy look-up table. Version 7. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/31433?version=7

Soil fungal (ITS) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) – OTU taxonomic function look-up table (subset of dataset 25426)

Nawaz, Ali (2022): Soil fungal (ITS) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) - OTU taxonomic function look-up table (subset of dataset 25426). Version 8. Biodiversity Exploratories Information System. Dataset. https://doi.org/10.25829/bexis.31353-7

Soil fungal (ITS) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) – OTU abundances (subset of dataset 25026)

Nawaz, Ali (2022): Soil fungal (ITS) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) - OTU abundances (subset of dataset 25026). Version 9. Biodiversity Exploratories Information System. Dataset. https://doi.org/10.25829/bexis.31352-8

Soil bacterial (16S) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) – OTU abundances (subset of dataset 25346)

Nawaz, Ali (2022): Soil bacterial (16S) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) - OTU abundances (subset of dataset 25346). Version 10. Biodiversity Exploratories Information System. Dataset. https://doi.org/10.25829/bexis.31349-9

Soil bacterial (16S) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) – OTU taxonomic look-up table (subset of dataset 25466)

Nawaz, Ali (2022): Soil bacterial (16S) communities from 10 grassland plots in Germany (2015-2018; Illumina MiSeq) - OTU taxonomic look-up table (subset of dataset 25466). Version 7. Biodiversity Exploratories Information System. Dataset. https://doi.org/10.25829/bexis.31350-6

Sampling protocol – soil sampling campaign 2021, all experimental plots (EPs), organic layer + 0-10 cm

Schnabel, Beatrix; Schöning, Ingo (2021): Sampling protocol - soil sampling campaign 2021, all experimental plots (EPs), organic layer + 0-10 cm. Version 21. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/31037?version=21

Absolute abundances of soil nitrification genes in 25 ALB grassland SADE-EPs (2015-2017)

Michas, Antonios (2021): Absolute abundances of soil nitrification genes in 25 ALB grassland SADE-EPs (2015-2017). Version 7. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/30975?version=7

Abundant soil fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) – ASV taxonomic look-up table

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Abundant soil fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) - ASV taxonomic look-up table. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26473?version=3

Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26470?version=3

Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26469?version=3

Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26468?version=3

Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26467?version=3

Abundance of beech root-associated fungi 2014 and 2017 in Schorfheide-Chorin (Beech Transplant Experiment) – OTU taxonomic look-up table

Buscot, Francois; Wubet, Tesfaye; Polle, Andrea; Pena, Rodica; Goldmann, Kezia; Ammerschubert, Silke (2020): Abundance of beech root-associated fungi 2014 and 2017 in Schorfheide-Chorin (Beech Transplant Experiment) - OTU taxonomic look-up table. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26247?version=3

Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26472?version=3

Arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27691?version=3

Arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27690?version=3

Arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27689?version=3

Arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27688?version=3

Arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27687?version=3

Arbuscular mycorrhizal fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) – ASV taxonomic look-up table

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Arbuscular mycorrhizal fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) - ASV taxonomic look-up table. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27686?version=3

Arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27692?version=3

Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia; Wubet, Tesfaye (2020): Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - ASV abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26471?version=3

Abundance of beech root-associated fungi 2014 and 2017 in Schorfheide-Chorin (Beech Transplant Experiment)

Buscot, Francois; Wubet, Tesfaye; Polle, Andrea; Pena, Rodica; Goldmann, Kezia; Ammerschubert, Silke (2020): Abundance of beech root-associated fungi 2014 and 2017 in Schorfheide-Chorin (Beech Transplant Experiment). Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/26246?version=4

Comparision of fungal communities in bark beetle affected und unaffected spruces on HEW51

Goldmann, Kezia (2020): Comparision of fungal communities in bark beetle affected und unaffected spruces on HEW51. Version 6. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/27446?version=6

Abundant arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – putative AMF abundances

Goldmann, Kezia; Buscot, Francois; Wubet, Tesfaye (2019): Abundant arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - putative AMF abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25452?version=3

Abundant arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – putative AMF abundances

Goldmann, Kezia; Buscot, Francois; Wubet, Tesfaye (2019): Abundant arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - putative AMF abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25450?version=3

Soil bacterial (16S) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) – OTU taxonomic look-up table

Buscot, Francois; Wubet, Tesfaye; Nawaz, Ali (2019): Soil bacterial (16S) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) - OTU taxonomic look-up table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25466?version=2

Abundant arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – putative AMF abundances

Goldmann, Kezia; Buscot, Francois; Wubet, Tesfaye (2019): Abundant arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - putative AMF abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25451?version=3

Abundant arbuscular mycorrhizal fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) – putative AMF taxonomic look-up table

Goldmann, Kezia; Buscot, Francois; Wubet, Tesfaye (2019): Abundant arbuscular mycorrhizal fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) - putative AMF taxonomic look-up table. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25446?version=3

Soil bacterial (16S) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Nawaz, Ali (2019): Soil bacterial (16S) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) - OTU abundances. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25346?version=2

Soil fungal (ITS) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Nawaz, Ali (2019): Soil fungal (ITS) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) - OTU abundances. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25026?version=2

Abundant arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – putative AMF abundances

Goldmann, Kezia; Buscot, Francois; Wubet, Tesfaye (2019): Abundant arbuscular mycorrhizal fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - putative AMF abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25448?version=3

Abundant arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – putative AMF abundances

Goldmann, Kezia; Buscot, Francois; Wubet, Tesfaye (2019): Abundant arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - putative AMF abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25447?version=3

Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia (2019): Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - OTU abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24572?version=3

Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia (2019): Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2017; Illumina MiSeq) - OTU abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24571?version=3

Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia (2019): Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - OTU abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24570?version=3

Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia (2019): Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - OTU abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24569?version=3

Abundant soil fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) – OTU taxonomic look-up table

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia (2019): Abundant soil fungi on all 300 EPs (from Soil Sampling Campains 2011, 2014 and 2017; Illumina MiSeq) - OTU taxonomic look-up table. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24566?version=3

Soil fungal (ITS) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) – OTU taxonomic function look-up table

Buscot, Francois; Wubet, Tesfaye; Nawaz, Ali (2019): Soil fungal (ITS) communities from 25 ALB grassland SADE-EPs (from Soil Sampling Campain 2015, 2016, 2017, 2018; Illumina MiSeq) - OTU taxonomic function look-up table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25426?version=2

Abundant arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) – putative AMF abundances

Goldmann, Kezia; Buscot, Francois; Wubet, Tesfaye (2019): Abundant arbuscular mycorrhizal fungi on all 150 grassland EPs (from Soil Sampling Campain 2014; Illumina MiSeq) - putative AMF abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25449?version=3

Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia (2019): Abundant soil fungi on all 150 grassland EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - OTU abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24567?version=3

Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) – OTU abundances

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia (2019): Abundant soil fungi on all 150 forest EPs (from Soil Sampling Campain 2011; Illumina MiSeq) - OTU abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24568?version=3

16S and ITS bulk soil, rhizosphere, and root endosphere at 13 grassland plots each in Hainich (2014) and Schwäbische Alb (2015), BELOW – raw sequence data (fastq-files)

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2019): 16S and ITS bulk soil, rhizosphere, and root endosphere at 13 grassland plots each in Hainich (2014) and Schwäbische Alb (2015), BELOW - raw sequence data (fastq-files). Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/25506?version=2

Fungal ITS rhizosphere and root community composition, greenhouse experiment in the Botanical Garden in Halle (Saale), 2015, BELOW – taxonomic look-up table

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Fungal ITS rhizosphere and root community composition, greenhouse experiment in the Botanical Garden in Halle (Saale), 2015, BELOW – taxonomic look-up table. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24448?version=3

Fungal ITS rhizosphere community composition (filter technique) at 46 grassland plots, Schorfheide, Hainich and Schwäbische Alb, 2015, BELOW – OTU abundance table

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Fungal ITS rhizosphere community composition (filter technique) at 46 grassland plots, Schorfheide, Hainich and Schwäbische Alb, 2015, BELOW – OTU abundance table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24406?version=2

Fungal ITS root endophyte community composition at 13 grassland plots, Hainich, 2014, BELOW

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Fungal ITS root endophyte community composition at 13 grassland plots, Hainich, 2014, BELOW. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/23186?version=3

Fungal ITS bulk soil and rhizosphere community composition at 13 grassland plots, Hainich, 2014, BELOW

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Fungal ITS bulk soil and rhizosphere community composition at 13 grassland plots, Hainich, 2014, BELOW. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/22627?version=4

Fungal ITS rhizosphere community composition (filter technique) at 46 grassland plots, Schorfheide, Hainich and Schwäbische Alb, 2015, BELOW – taxonomic look-up table

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Fungal ITS rhizosphere community composition (filter technique) at 46 grassland plots, Schorfheide, Hainich and Schwäbische Alb, 2015, BELOW – taxonomic look-up table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24446?version=2

Fungal ITS rhizosphere community composition (filter technique) in phytometer and resident plants at 13 grassland plots, Schwäbische Alb, 2015, BELOW – taxonomic look-up table

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Fungal ITS rhizosphere community composition (filter technique) in phytometer and resident plants at 13 grassland plots, Schwäbische Alb, 2015, BELOW – taxonomic look-up table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24447?version=2

Fungal ITS rhizosphere community composition (filter technique) in phytometer and resident plants at 13 grassland plots, Schwäbische Alb, 2015, BELOW – OTU abundance table

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Fungal ITS rhizosphere community composition (filter technique) in phytometer and resident plants at 13 grassland plots, Schwäbische Alb, 2015, BELOW – OTU abundance table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24407?version=2

Bacterial 16S bulk soil and rhizosphere community composition at 13 grassland plots, Hainich, 2014, BELOW

Buscot, Francois; Wubet, Tesfaye; Schoeps, Ricardo (2018): Bacterial 16S bulk soil and rhizosphere community composition at 13 grassland plots, Hainich, 2014, BELOW. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/22628?version=3

Fungal ITS rhizosphere and root community composition, greenhouse experiment in the Botanical Garden in Halle (Saale), 2015, BELOW – OTU abundance table

Buscot, Francois; Wubet, Tesfaye; Goldmann, Kezia; Schoeps, Ricardo (2018): Fungal ITS rhizosphere and root community composition, greenhouse experiment in the Botanical Garden in Halle (Saale), 2015, BELOW – OTU abundance table. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de/ddm/data/Showdata/24409?version=3

Non-public datasets

Potential nitrification, soil sampling campaign (SSC) 2021, all experimental plots EPs

Schloter, Michael (2025): Potential nitrification, soil sampling campaign (SSC) 2021, all experimental plots EPs. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 32020

Soil metagenomes from 55 grassland plots, SSC 2017

Kurth, Julia (2025): Soil metagenomes from 55 grassland plots, SSC 2017. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 32044

Biocrust metagenomes from 59 forest plots of Biocrust and Bulk Soil samples, 2018

Kurth, Julia (2025): Biocrust metagenomes from 59 forest plots of Biocrust and Bulk Soil samples, 2018. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 32045

16S rRNA gene (V3 region) DNA-based analysis of bacterial soil communities at sequence variant level in all reduced land-use intensity experiment (REX) and land-use experiment (LUX) plots, using QIIME2-based bioinformatics, 2021

Overmann, Jörg; Vieira, Selma (2024): 16S rRNA gene (V3 region) DNA-based analysis of bacterial soil communities at sequence variant level in all reduced land-use intensity experiment (REX) and land-use experiment (LUX) plots, using QIIME2-based bioinformatics, 2021. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31936

Full genome sequence of Paraconexibacter strain AEG42_29

Vieira, Selma (2024): Full genome sequence of Paraconexibacter strain AEG42_29. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31922

16S rRNA gene (V3 region) DNA-based analysis of microbial soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021

Vieira, Selma; Sikorski, Johannes; Overmann, Jörg (2024): 16S rRNA gene (V3 region) DNA-based analysis of microbial soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021. Version 6. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31800

16S rRNA gene (V3 region) DNA-based analysis of microbial soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021

Vieira, Selma; Sikorski, Johannes; Overmann, Jörg (2024): 16S rRNA gene (V3 region) DNA-based analysis of microbial soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021. Version 6. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31801

16S rRNA gene (V1-V3 region) RNA-based analysis of archaeal soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021

Overmann, Jörg; Vieira, Selma (2024): 16S rRNA gene (V1-V3 region) RNA-based analysis of archaeal soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31812

Soil metagenomes from all grassland 150 experimental plots (EP), SSC 2023

Wicht, Ann-Christin (2024): Soil metagenomes from all grassland 150 experimental plots (EP), SSC 2023. Version 6. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31760

16S rRNA gene (V3 region) DNA-based analysis of bacterial soil communities at sequence variant level in all forest gap experiment (FOX) plots, using QIIME2-based bioinformatics, 2020-2021

Overmann, Jörg; Vieira, Selma (2024): 16S rRNA gene (V3 region) DNA-based analysis of bacterial soil communities at sequence variant level in all forest gap experiment (FOX) plots, using QIIME2-based bioinformatics, 2020-2021. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31829

16S rRNA gene (V3 region) RNA-based analysis of bacterial soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021

Vieira, Selma; Sikorski, Johannes; Overmann, Jörg (2024): 16S rRNA gene (V3 region) RNA-based analysis of bacterial soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021. Version 5. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31805

16S rRNA gene (V3 region) RNA-based analysis of microbial soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021

Vieira, Selma; Sikorski, Johannes; Overmann, Jörg (2024): 16S rRNA gene (V3 region) RNA-based analysis of microbial soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021. Version 6. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31864

Forest Gap Experiment (FOX): DNA-based analysis of soil fungal communities (Illumina MiSeq) – ASV abundances

Buscot, Francois; Goldmann, Kezia (2024): Forest Gap Experiment (FOX): DNA-based analysis of soil fungal communities (Illumina MiSeq) - ASV abundances. Version 7. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31838

16S rRNA gene (V1-V3 region) DNA-based analysis of archaeal soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021

Overmann, Jörg; Vieira, Selma (2024): 16S rRNA gene (V1-V3 region) DNA-based analysis of archaeal soil communities at sequence variant level in 150 forest plots, using QIIME2-based bioinformatics, 2021. Version 5. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31810

16S rRNA gene (V1-V3 region) RNA-based analysis of archaeal soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021

Overmann, Jörg; Vieira, Selma (2024): 16S rRNA gene (V1-V3 region) RNA-based analysis of archaeal soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021. Version 5. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31811

Forest Gap Experiment (FOX): DNA-based analysis of soil fungal communities (Illumina MiSeq) – ASV taxonomic look-up table

Buscot, Francois; Goldmann, Kezia (2024): Forest Gap Experiment (FOX): DNA-based analysis of soil fungal communities (Illumina MiSeq) - ASV taxonomic look-up table. Version 5. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31839

16S rRNA gene (V1-V3 region) DNA-based analysis of archaeal soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021

Overmann, Jörg; Vieira, Selma (2024): 16S rRNA gene (V1-V3 region) DNA-based analysis of archaeal soil communities at sequence variant level in 150 grassland plots, using QIIME2-based bioinformatics, 2021. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31809

Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2011; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2011; Illumina MiSeq) - AMF abundances. Version 7. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31947

Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2021; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2021; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31950

Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2014; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2014; Illumina MiSeq) - AMF abundances. Version 5. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31948

Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2017; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2017; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31949

Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2017; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2017; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31954

Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2023; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 forest plots (from Soil Sampling Campain 2023; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31951

Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2011; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2011; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31952

Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2021; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2021; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31955

Arbuscular mycorrhizal fungi on all 300 plots (from Soil Sampling Campains 2011, 2014, 2017, 2021 and 2023; Illumina MiSeq) – AMF taxonomic look-up table

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 300 plots (from Soil Sampling Campains 2011, 2014, 2017, 2021 and 2023; Illumina MiSeq) - AMF taxonomic look-up table. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31957

Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2014; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2014; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31953

Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2023; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on all 150 grassland plots (from Soil Sampling Campain 2023; Illumina MiSeq) - AMF abundances. Version 4. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31956

Arbuscular mycorrhizal fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) – AMF abundances

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) - AMF abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31958

Arbuscular mycorrhizal fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) – AMF taxonomy look-up table

Goldmann, Kezia (2024): Arbuscular mycorrhizal fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) - AMF taxonomy look-up table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31959

General soil fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) – OTU abundances

Goldmann, Kezia (2024): General soil fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) - OTU abundances. Version 3. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31960

General soil fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) – taxonomy look-up table

Goldmann, Kezia (2024): General soil fungi on agricultural EPs (from soil pilot sampling April 2024; Illumina MiSeq) - taxonomy look-up table. Version 2. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31961

Sampling protocol – soil sampling campaign 2023, all experimental plots (EPs), organic layer + 0-10 cm

Schnabel, Beatrix; Schöning, Ingo (2023): Sampling protocol - soil sampling campaign 2023, all experimental plots (EPs), organic layer + 0-10 cm. Version 7. Biodiversity Exploratories Information System. Dataset. https://www.bexis.uni-jena.de. Dataset ID= 31646

The so-called core projects of the BE emerged from the site selection project and the establishment of the exploratories (2006-2008). Since 2008, they have been providing the infrastructure and collecting important basic information on land use, diversity and ecosystem processes (long-term monitoring) for all projects. In addition, they coordinate project-wide activities such as various large-scale experiments.